Publications by the researcher in collaboration with ANSELMO TOMAS FERNANDEZ PENA (19)

2024

  1. QPU integration in OpenCL for heterogeneous programming

    Journal of Supercomputing, Vol. 80, Núm. 8, pp. 11682-11703

2020

  1. A big data approach to metagenomics for all-food-sequencing

    BMC Bioinformatics, Vol. 21, Núm. 1

2017

  1. PASTASpark: Multiple sequence alignment meets Big Data

    Bioinformatics, Vol. 33, Núm. 18, pp. 2948-2950

2016

  1. Boosting performance of a Statistical Machine Translation system using dynamic parallelism

    Journal of Computational Science, Vol. 13, pp. 37-48

  2. Power and Energy Implications of the Number of Threads Used on the Intel Xeon Phi

    Annals of Multicore and GPU Programming: AMGP, Vol. 3, Núm. 1, pp. 55-65

  3. SparkBWA: Speeding up the alignment of high-Throughput DNA sequencing data

    PLoS ONE, Vol. 11, Núm. 5

2015

  1. BigBWA: Approaching the Burrows-Wheeler aligner to Big Data technologies

    Bioinformatics, Vol. 31, Núm. 24, pp. 4003-4005

  2. Power and energy implications of the number of threads used on the Intel Xeon Phi

    Annals of Multicore and GPU Programming: AMGP, Vol. 2, Núm. 1, pp. 55-65

2014

  1. 3DyRM: a dynamic roofline model including memory latency information

    Journal of Supercomputing, Vol. 70, Núm. 2, pp. 696-708

  2. A hardware counter-based toolkit for the analysis of memory accesses in SMPs

    Concurrency Computation Practice and Experience, Vol. 26, Núm. 6, pp. 1328-1341

  3. Análisis morfosintáctico y clasificación de entidades nombradas en un entorno Big Data

    Procesamiento del lenguaje natural, Núm. 53, pp. 17-24

  4. Multiobjective optimization technique based on monitoring information to increase the performance of thread migration on multicores

    2014 IEEE International Conference on Cluster Computing, CLUSTER 2014

  5. Perldoop: Efficient execution of Perl scripts on Hadoop clusters

    Proceedings - 2014 IEEE International Conference on Big Data, IEEE Big Data 2014

  6. Using an extended Roofline Model to understand data and thread affinities on NUMA systems

    Annals of Multicore and GPU Programming: AMGP, Vol. 1, Núm. 1, pp. 56-67

  7. Using sampled information: Is it enough for the sparse matrix-vector product locality optimization?

    Concurrency Computation Practice and Experience, Vol. 26, Núm. 1, pp. 98-117

2013

  1. A flexible and dynamic page migration infrastructure based on hardware counters

    Journal of Supercomputing, Vol. 65, Núm. 2, pp. 930-948

2012

  1. A graphical tool for performance analysis of multicore systems based on the Roofline Model

    Proceedings of the 2012 10th IEEE International Symposium on Parallel and Distributed Processing with Applications, ISPA 2012

  2. Hardware counters based analysis of memory accesses in SMPs

    Proceedings of the 2012 10th IEEE International Symposium on Parallel and Distributed Processing with Applications, ISPA 2012

2011

  1. Analyzing the execution of sparse matrix-vector product on the Finisterrae SMP-NUMA system

    Journal of Supercomputing, Vol. 58, Núm. 2, pp. 195-205